NOTE: Emory's first year of varsity competition in the NCAA was the 1986-87 school year.
| Year | W | L | UAA Finish |
W | L | NCAA | Coach |
| 1986-87 | 7 | 14 | - | - | - | - | Lloyd Winston |
| 1987-88 | 15 | 11 | 5th | 6 | 7 | - | Lloyd Winston |
| 1988-89 | 16 | 9 | 1st | 10 | 3 | - | Lloyd Winston |
| 1989-90 | 25 | 4 | 1st | 13 | 1 | Round of 16 | Lloyd Winston |
| 1990-91 | 10 | 16 | 7th | 5 | 9 | - | Lloyd Winston |
| 1991-92 | 9 | 16 | 7th | 4 | 10 | - | Lloyd Winston |
| 1992-93 | 12 | 13 | 8th | 4 | 10 | - | Pete Manuel |
| 1993-94 | 4 | 21 | 8th | 2 | 12 | - | Pete Manuel |
| 1994-95 | 7 | 18 | 8th | 4 | 10 | - | Pete Manuel |
| 1995-96 | 6 | 18 | 9th | 1 | 13 | - | Pete Manuel |
| 1996-97 | 12 | 13 | 7th | 5 | 9 | - | Pete Manuel |
| 1997-98 | 14 | 11 | 4th | 7 | 7 | - | Pete Manuel |
| 1998-99 | 11 | 14 | 4th | 7 | 7 | - | Brett Zuver |
| 1999-00 | 11 | 14 | 6th | 5 | 10 | - | Brett Zuver |
| 2000-01 | 13 | 12 | 3rd | 9 | 6 | - | Brett Zuver |
| 2001-02 | 9 | 16 | 5th | 4 | 10 | - | Brett Zuver |
| 2002-03 | 14 | 11 | 4th | 6 | 8 | - | Brett Zuver |
| 2003-04 | 11 | 14 | 6th | 5 | 9 | - | Brett Zuver |
| 2004-05 | 15 | 10 | 5th | 6 | 8 | - | Brett Zuver |
| 2005-06 | 11 | 14 | t-7th | 4 | 10 | - | Brett Zuver |
| 2006-07 | 8 | 17 | 7th | 2 | 12 | - | Brett Zuver |
| 2007-08 | 10 | 15 | 7th | 3 | 11 | - | Jason Zimmerman |
| 2008-09 | 7 | 18 | 8th | 2 | 12 | - | Jason Zimmerman |
| 2009-10 | 15 | 10 | t-3rd | 7 | 7 | - | Jason Zimmerman |
| 2010-11 | 20 | 5 | 2nd | 11 | 3 | - | Jason Zimmerman |
| 2011-12 | 19 | 6 | t-3rd | 8 | 6 | - | Jason Zimmerman |
| 2012-13 | 20 | 7 | t-1st | 10 | 4 | Round of 32 | Jason Zimmerman |
| 2013-14 | 19 | 9 | 2nd | 9 | 5 | Elite Eight | Jason Zimmerman |
| 2014-15 | 22 | 6 | 1st | 10 | 4 | Round of 16 | Jason Zimmerman |
| 2015-16 | 20 | 8 | 1st | 11 | 3 | Round of 16 | Jason Zimmerman |
| 2016-17 | 19 | 8 | 3rd | 9 | 5 | Round of 32 | Jason Zimmerman |
| 2017-18 | 23 | 5 | 2nd | 12 | 2 | Round of 16 | Jason Zimmerman |
| 2018-19 | 20 | 6 | 1st | 11 | 3 | First Round | Jason Zimmerman |
| 2019-20 | 22 | 5 | t-1st | 11 | 3 | Round of 32 | Jason Zimmerman |
| 2021-22 | 20 | 6 | 1st | 12 | 2 | Round of 32 | Jason Zimmerman |
| 2022-23 | 17 | 9 | 3rd | 8 | 6 | First Round | Jason Zimmerman |
**2020-21 season cancelled due to COVID-19 pandemic**